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STRINGSTRING
PP1S11819_1V6.1 protein (Physcomitrella patens) - STRING interaction network
"PP1S11819_1V6.1" - annotation not available in Physcomitrella patens
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PP1S11819_1V6.1annotation not available (315 aa)    
Predicted Functional Partners:
PP1S66_139V6.1
Predicted protein; Belongs to the class-I aminoacyl-tRNA synthetase family (640 aa)
   
 
  0.954
PP1S75_41V6.1
Predicted protein; Belongs to the class-I aminoacyl-tRNA synthetase family (1006 aa)
   
   
  0.948
PP1S450_27V6.1
annotation not available (66 aa)
   
 
  0.948
PP1S38_176V6.1
Predicted protein (1141 aa)
   
   
  0.943
GATB
Glutamyl-tRNA(Gln) amidotransferase subunit B, chloroplastic/mitochondrial; Allows the formation of correctly charged Gln-tRNA(Gln) through the transamidation of misacylated Glu-tRNA(Gln) in chloroplasts and mitochondria. The reaction takes place in the presence of glutamine and ATP through an activated gamma-phospho- Glu-tRNA(Gln) (562 aa)
 
 
  0.943
PP1S26_83V6.1
annotation not available (1151 aa)
   
   
  0.942
PP1S324_15V6.1
annotation not available (112 aa)
   
 
  0.924
PP1S169_50V6.1
Predicted protein (480 aa)
     
   
  0.918
PP1S358_20V6.1
Predicted protein (491 aa)
     
   
  0.904
PP1S1_515V6.1
Tyrosine--tRNA ligase (502 aa)
   
   
  0.838
Your Current Organism:
Physcomitrella patens
NCBI taxonomy Id: 3218
Other names: P. patens, Physcomitrella patens, Physcomitrella patens (Hedw.) Bruch & Schimp., Physcomitrella patens subsp. patens, Physcomitrium patens, Physcomitrium patens (Hedw.) Mitt.
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