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STRINGSTRING
PP1S118_69V6.1 protein (Physcomitrella patens) - STRING interaction network
"PP1S118_69V6.1" - Predicted protein in Physcomitrella patens
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PP1S118_69V6.1Predicted protein (630 aa)    
Predicted Functional Partners:
PP1S163_26V6.2
Predicted protein (583 aa)
 
   
  0.815
PP1S5151_1V6.1
Predicted protein (324 aa)
 
   
  0.806
PP1S29_338V6.1
Predicted protein (278 aa)
 
   
  0.805
PP1S145_135V6.1
Predicted protein (221 aa)
           
  0.791
PP1S3_10V6.1
Predicted protein (456 aa)
           
  0.779
PP1S88_47V6.1
Predicted protein (666 aa)
         
  0.697
PP1S402_42V6.2
Predicted protein (664 aa)
         
  0.697
PP1S81_164V6.1
Predicted protein; Belongs to the mitochondrial carrier (TC 2.A.29) family (327 aa)
           
  0.690
PP1S402_34V6.1
Predicted protein (869 aa)
           
  0.684
PP1S116_74V6.2
Predicted protein (765 aa)
           
  0.684
Your Current Organism:
Physcomitrella patens
NCBI taxonomy Id: 3218
Other names: P. patens, Physcomitrella patens, Physcomitrella patens (Hedw.) Bruch & Schimp., Physcomitrella patens subsp. patens, Physcomitrium patens, Physcomitrium patens (Hedw.) Mitt.
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