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STRINGSTRING
PP1S119_105V6.1 protein (Physcomitrella patens) - STRING interaction network
"PP1S119_105V6.1" - Predicted protein in Physcomitrella patens
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PP1S119_105V6.1Predicted protein (500 aa)    
Predicted Functional Partners:
PP1S88_135V6.1
Predicted protein (277 aa)
     
        0.885
PP1S66_288V6.1
annotation not available (200 aa)
     
        0.885
PP1S64_89V6.1
annotation not available (232 aa)
     
        0.885
PP1S53_101V6.1
annotation not available (1064 aa)
     
        0.885
PP1S49_269V6.1
Predicted protein; Belongs to the universal ribosomal protein uL3 family (260 aa)
     
        0.885
PP1S46_194V6.2
Proliferating cell nuclear antigen; This protein is an auxiliary protein of DNA polymerase delta and is involved in the control of eukaryotic DNA replication by increasing the polymerase’s processibility during elongation of the leading strand (263 aa)
     
        0.885
PP1S43_210V6.1
Predicted protein (119 aa)
     
        0.885
PP1S24_165V6.1
Predicted protein (141 aa)
     
        0.885
PP1S227_112V6.1
Proliferating cell nuclear antigen; This protein is an auxiliary protein of DNA polymerase delta and is involved in the control of eukaryotic DNA replication by increasing the polymerase’s processibility during elongation of the leading strand (224 aa)
     
        0.885
PP1S1_793V6.3
annotation not available (291 aa)
     
        0.885
Your Current Organism:
Physcomitrella patens
NCBI taxonomy Id: 3218
Other names: P. patens, Physcomitrella patens, Physcomitrella patens (Hedw.) Bruch & Schimp., Physcomitrella patens subsp. patens, Physcomitrium patens, Physcomitrium patens (Hedw.) Mitt.
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