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  • 11.0 (preview - - version 10.5 still available here)
STRINGSTRING
PP1S119_115V6.1 protein (Physcomitrella patens) - STRING interaction network
"PP1S119_115V6.1" - Predicted protein in Physcomitrella patens
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PP1S119_115V6.1Predicted protein (79 aa)    
Predicted Functional Partners:
PP1S6_395V6.3
Predicted protein (206 aa)
     
 
  0.993
PP1S5_281V6.1
Predicted protein (288 aa)
     
 
  0.993
PP1S289_41V6.1
Predicted protein (209 aa)
     
 
  0.993
PP1S403_56V6.1
Predicted protein (162 aa)
     
 
  0.991
PP1S152_158V6.1
Predicted protein (170 aa)
     
 
  0.991
PP1S152_156V6.1
Predicted protein (170 aa)
     
 
  0.991
PP1S80_170V6.1
Predicted protein (241 aa)
     
 
  0.961
PP1S167_98V6.1
Predicted protein (224 aa)
     
 
  0.961
PP1S132_62V6.1
Predicted protein (230 aa)
     
 
  0.961
PP1S16_358V6.1
annotation not available (259 aa)
     
 
  0.960
Your Current Organism:
Physcomitrella patens
NCBI taxonomy Id: 3218
Other names: P. patens, Physcomitrella patens, Physcomitrella patens (Hedw.) Bruch & Schimp., Physcomitrella patens subsp. patens, Physcomitrium patens, Physcomitrium patens (Hedw.) Mitt.
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