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STRINGSTRING
PP1S119_86V6.1 protein (Physcomitrella patens) - STRING interaction network
"PP1S119_86V6.1" - annotation not available in Physcomitrella patens
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PP1S119_86V6.1annotation not available (359 aa)    
Predicted Functional Partners:
PP1S83_150V6.2
Predicted protein (241 aa)
           
  0.781
PP1S34_360V6.1
Bifunctional dihydrofolate reductase-thymidylate synthase; Bifunctional enzyme. Involved in de novo dTMP biosynthesis. Key enzyme in folate metabolism (632 aa)
   
   
  0.699
PP1S68_274V6.1
Predicted protein (392 aa)
           
  0.692
PP1S34_457V6.1
Predicted protein (392 aa)
           
  0.692
PP1S3_417V6.1
annotation not available (1860 aa)
   
   
  0.630
PP1S5942_1V6.1
Ribonuclease; Endonuclease that specifically degrades the RNA of RNA- DNA hybrids (108 aa)
   
 
  0.626
PP1S52_162V6.1
Ribonuclease; Endonuclease that specifically degrades the RNA of RNA- DNA hybrids (307 aa)
   
 
  0.626
PP1S336_13V6.1
annotation not available (338 aa)
   
 
  0.626
PP1S5_195V6.1
Predicted protein; Belongs to the class-I aminoacyl-tRNA synthetase family (415 aa)
         
  0.598
PP1S22_311V6.1
Predicted protein; Belongs to the class-I aminoacyl-tRNA synthetase family (414 aa)
         
  0.598
Your Current Organism:
Physcomitrella patens
NCBI taxonomy Id: 3218
Other names: P. patens, Physcomitrella patens, Physcomitrella patens (Hedw.) Bruch & Schimp., Physcomitrella patens subsp. patens, Physcomitrium patens, Physcomitrium patens (Hedw.) Mitt.
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