• Version:
  • 11.0 (preview - - version 10.5 still available here)
STRINGSTRING
PP1S11_19V6.1 protein (Physcomitrella patens) - STRING interaction network
"PP1S11_19V6.1" - annotation not available in Physcomitrella patens
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PP1S11_19V6.1annotation not available (1576 aa)    
Predicted Functional Partners:
PP1S246_119V6.1
Predicted protein (990 aa)
     
 
  0.790
PP1S20_267V6.1
Predicted protein (540 aa)
     
 
  0.730
PP1S56_120V6.1
Predicted protein (604 aa)
     
 
  0.705
PP1S73_18V6.1
Predicted protein (742 aa)
     
 
  0.698
PP1S127_123V6.2
Predicted protein; Belongs to the peptidase C19 family (583 aa)
     
 
  0.692
PP1S269_91V6.1
Predicted protein (471 aa)
     
 
  0.692
PP1S241_31V6.1
Predicted protein (697 aa)
     
 
  0.691
PP1S169_108V6.1
Predicted protein (228 aa)
       
 
  0.679
PP1S78_50V6.1
Predicted protein (998 aa)
     
 
  0.678
PP1S39_105V6.1
Predicted protein (431 aa)
     
 
  0.678
Your Current Organism:
Physcomitrella patens
NCBI taxonomy Id: 3218
Other names: P. patens, Physcomitrella patens, Physcomitrella patens (Hedw.) Bruch & Schimp., Physcomitrella patens subsp. patens, Physcomitrium patens, Physcomitrium patens (Hedw.) Mitt.
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