STRINGSTRING
PP1S11_22V6.1 protein (Physcomitrella patens) - STRING interaction network
"PP1S11_22V6.1" - Annotation not available in Physcomitrella patens
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PP1S11_22V6.1Annotation not available (1526 aa)    
Predicted Functional Partners:
PP1S79_275V6.1
Annotation not available (171 aa)
     
 
  0.642
PP1S76_142V6.3
Predicted protein (432 aa)
     
 
  0.642
HDMA1502
SWIRM domain protein (947 aa)
     
 
  0.642
HDMA1503
Amino_oxidase domain protein (1789 aa)
     
 
  0.642
PP1S3107_1V6.1
Predicted protein (386 aa)
     
 
  0.642
HDMA1504
SWIRM domain protein (1280 aa)
     
 
  0.642
HDMA1501
SWIRM domain protein (849 aa)
     
 
  0.642
PP1S190_85V6.1
Predicted protein (256 aa)
       
      0.641
PP1S367_3V6.1
Predicted protein (246 aa)
       
      0.487
PP1S42_67V6.1
Predicted protein (2040 aa)
     
 
  0.470
Your Current Organism:
Physcomitrella patens
NCBI taxonomy Id: 3218
Other names: Bryophyta, Bryophytina, Bryopsida, Funariaceae, Funariales, Funariidae, Moss Superclass V, Musci, P. patens, Physcomitrella, Physcomitrella Bruch & Schimp, Physcomitrella patens, Physcomitrella patens (Hedw.) Bruch & Schimp., Physcomitrium patens, Physcomitrium patens (Hedw.) Mitt., bryophytes, mosses
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