STRINGSTRING
PP1S11_314V6.1 protein (Physcomitrella patens) - STRING interaction network
"PP1S11_314V6.1" - Annotation not available in Physcomitrella patens
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PP1S11_314V6.1Annotation not available (330 aa)    
Predicted Functional Partners:
PP1S198_54V6.1
Predicted protein (358 aa)
     
        0.463
PP1S188_71V6.1
Predicted protein (115 aa)
     
        0.463
PP1S50_102V6.1
Ribosomal protein L19 (208 aa)
     
   
  0.440
PP1S3_375V6.1
Ribosomal protein L19 (208 aa)
     
   
  0.440
PP1S302_25V6.1
Ribosomal protein L19 (208 aa)
     
   
  0.440
PP1S235_118V6.1
Ribosomal protein L19 (208 aa)
     
   
  0.440
PP1S144_37V6.1
Ribosomal protein L19 (208 aa)
     
   
  0.440
GTG1501
Transcription elongation factor SPT4; May regulate transcription elongation by RNA polymerase II. May enhance transcriptional pausing at sites proximal to the promoter, which may in turn facilitate the assembly of an elongation competent RNA polymerase II complex (120 aa)
           
  0.407
PP1S312_22V6.1
Predicted protein (500 aa)
           
  0.407
PP1S297_16V6.2
Predicted protein (505 aa)
           
  0.407
Your Current Organism:
Physcomitrella patens
NCBI taxonomy Id: 3218
Other names: Bryophyta, Bryophytina, Bryopsida, Funariaceae, Funariales, Funariidae, Moss Superclass V, Musci, P. patens, Physcomitrella, Physcomitrella Bruch & Schimp, Physcomitrella patens, Physcomitrella patens (Hedw.) Bruch & Schimp., Physcomitrium patens, Physcomitrium patens (Hedw.) Mitt., bryophytes, mosses
Server load: low (3%) [HD]