STRINGSTRING
PP1S11_56V6.1 protein (Physcomitrella patens) - STRING interaction network
"PP1S11_56V6.1" - Predicted protein in Physcomitrella patens
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PP1S11_56V6.1Predicted protein (361 aa)    
Predicted Functional Partners:
PP1S6496_2V6.1
Predicted protein (206 aa)
     
      0.645
PP1S76_15V6.1
Predicted protein (397 aa)
       
  0.589
PP1S2988_1V6.1
Predicted protein (181 aa)
       
  0.589
PP1S24_7V6.1
Predicted protein (2058 aa)
       
  0.589
PP1S6876_2V6.1
Predicted protein (237 aa)
         
  0.532
PP1S19_6V6.1
Predicted protein (338 aa)
         
  0.532
PP1S54_112V6.1
Predicted protein (243 aa)
   
          0.526
PP1S141_30V6.1
Predicted protein; Converts alpha-aldose to the beta-anomer (364 aa)
   
   
  0.518
PP1S3146_1V6.1
Predicted protein (537 aa)
   
 
  0.493
PP1S93_131V6.1
Predicted protein (2251 aa)
     
   
  0.490
Your Current Organism:
Physcomitrella patens
NCBI taxonomy Id: 3218
Other names: Bryophyta, Bryophytina, Bryopsida, Funariaceae, Funariales, Funariidae, Moss Superclass V, Musci, P. patens, Physcomitrella, Physcomitrella Bruch & Schimp, Physcomitrella patens, Physcomitrella patens (Hedw.) Bruch & Schimp., Physcomitrium patens, Physcomitrium patens (Hedw.) Mitt., bryophytes, mosses
Server load: low (8%) [HD]