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CHR1527 protein (Physcomitrella patens) - STRING interaction network
"CHR1527" - Chromatin-remodeling complex ATPase in Physcomitrella patens
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CHR1527Chromatin-remodeling complex ATPase; SNF2 family DNA-dependent ATPase (1047 aa)    
Predicted Functional Partners:
GTC1501
FACT complex subunit (1060 aa)
     
 
  0.987
SDG1506
annotation not available (2067 aa)
     
 
  0.954
SDG1508.1
Histone-lysine N-methyltransferase-like protein (1402 aa)
     
 
  0.954
PP1S9_156V6.1
annotation not available (829 aa)
     
 
  0.949
PP1S210_36V6.1
DNA helicase; Belongs to the MCM family (877 aa)
     
 
  0.948
PP1S16_310V6.1
annotation not available (707 aa)
     
 
  0.948
PP1S54_136V6.1
annotation not available (1001 aa)
     
 
  0.944
PP1S31_86V6.1
DNA helicase; Belongs to the MCM family (713 aa)
     
 
  0.943
PP1S217_34V6.1
Predicted protein (161 aa)
     
 
  0.939
PP1S503_12V6.1
Predicted protein (226 aa)
     
 
  0.936
Your Current Organism:
Physcomitrella patens
NCBI taxonomy Id: 3218
Other names: P. patens, Physcomitrella patens, Physcomitrella patens (Hedw.) Bruch & Schimp., Physcomitrella patens subsp. patens, Physcomitrium patens, Physcomitrium patens (Hedw.) Mitt.
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