• Version:
  • 11.0 (preview - - version 10.5 still available here)
STRINGSTRING
PP1S123_162V6.1 protein (Physcomitrella patens) - STRING interaction network
"PP1S123_162V6.1" - annotation not available in Physcomitrella patens
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PP1S123_162V6.1annotation not available (2263 aa)    
Predicted Functional Partners:
CPC1504
Structural maintenance of chromosomes protein (1196 aa)
     
   
  0.622
PP1S315_38V6.3
annotation not available (999 aa)
     
   
  0.621
PP1S217_88V6.1
Predicted protein (1210 aa)
     
   
  0.621
PP1S217_84V6.1
Predicted protein (627 aa)
     
   
  0.621
CPC1501
Structural maintenance of chromosomes protein (1258 aa)
     
   
  0.582
CPD1502
Condensin complex subunit 1; Regulatory subunit of the condensin complex, a complex required for conversion of interphase chromatin into mitotic-like condense chromosomes. The condensin complex probably introduces positive supercoils into relaxed DNA in the presence of type I topoisomerases and converts nicked DNA into positive knotted forms in the presence of type II topoisomerases (1623 aa)
           
  0.565
CPD1501
Condensin complex subunit 1; Regulatory subunit of the condensin complex, a complex required for conversion of interphase chromatin into mitotic-like condense chromosomes. The condensin complex probably introduces positive supercoils into relaxed DNA in the presence of type I topoisomerases and converts nicked DNA into positive knotted forms in the presence of type II topoisomerases (1668 aa)
           
  0.565
PP1S167_153V6.1
annotation not available (221 aa)
           
  0.510
PP1S2_220V6.1
Predicted protein (387 aa)
           
  0.437
PP1S154_6V6.1
Predicted protein (464 aa)
           
  0.437
Your Current Organism:
Physcomitrella patens
NCBI taxonomy Id: 3218
Other names: P. patens, Physcomitrella patens, Physcomitrella patens (Hedw.) Bruch & Schimp., Physcomitrella patens subsp. patens, Physcomitrium patens, Physcomitrium patens (Hedw.) Mitt.
Server load: low (8%) [HD]