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STRINGSTRING
PP1S123_58V6.1 protein (Physcomitrella patens) - STRING interaction network
"PP1S123_58V6.1" - Predicted protein in Physcomitrella patens
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PP1S123_58V6.1Predicted protein (178 aa)    
Predicted Functional Partners:
PP1S36_86V6.1
annotation not available (768 aa)
     
 
  0.917
PP1S127_123V6.2
Predicted protein; Belongs to the peptidase C19 family (583 aa)
     
 
  0.812
PP1S641_1V6.1
Predicted protein (807 aa)
     
 
  0.807
RS27
Arginine/serine-rich splicing factor RS27 transcript I (233 aa)
     
 
  0.792
PP1S141_20V6.1
Predicted protein (675 aa)
     
 
  0.756
PP1S56_120V6.1
Predicted protein (604 aa)
     
 
  0.720
PP1S52_75V6.2
Predicted protein (81 aa)
           
  0.700
PP1S87_109V6.1
Predicted protein (238 aa)
     
 
  0.693
PP1S116_80V6.1
Predicted protein (473 aa)
     
 
  0.693
PP1S245_93V6.1
annotation not available (977 aa)
       
 
  0.686
Your Current Organism:
Physcomitrella patens
NCBI taxonomy Id: 3218
Other names: P. patens, Physcomitrella patens, Physcomitrella patens (Hedw.) Bruch & Schimp., Physcomitrella patens subsp. patens, Physcomitrium patens, Physcomitrium patens (Hedw.) Mitt.
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