STRINGSTRING
PP1S123_90V6.1 protein (Physcomitrella patens) - STRING interaction network
"PP1S123_90V6.1" - Predicted protein in Physcomitrella patens
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PP1S123_90V6.1Predicted protein (371 aa)    
Predicted Functional Partners:
PP1S318_58V6.2
Predicted protein (370 aa)
     
 
  0.610
PP1S213_21V6.1
Predicted protein (372 aa)
     
 
  0.610
PP1S200_83V6.2
Predicted protein (200 aa)
     
   
  0.593
PP1S34_399V6.1
annotation not available (872 aa)
           
  0.593
PP1S31_220V6.1
Serine/threonine-protein phosphatase (303 aa)
       
 
  0.551
PP1S207_36V6.1
Serine/threonine-protein phosphatase (303 aa)
       
 
  0.551
PP1S1_421V6.1
annotation not available (353 aa)
       
 
  0.551
PP1S182_62V6.1
Predicted protein (370 aa)
       
 
  0.551
PP1S39_92V6.1
annotation not available (169 aa)
       
 
  0.541
PP1S31_312V6.1
Predicted protein (588 aa)
       
 
  0.541
Your Current Organism:
Physcomitrella patens
NCBI taxonomy Id: 3218
Other names: P. patens, Physcomitrella patens, Physcomitrella patens (Hedw.) Bruch & Schimp., Physcomitrella patens subsp. patens, Physcomitrium patens, Physcomitrium patens (Hedw.) Mitt.
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