STRINGSTRING
PP1S124_170V6.1 protein (Physcomitrella patens) - STRING interaction network
"PP1S124_170V6.1" - Predicted protein in Physcomitrella patens
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PP1S124_170V6.1Predicted protein (1595 aa)    
Predicted Functional Partners:
PP1S54_95V6.1
Predicted protein (358 aa)
     
  0.900
PP1S297_1V6.1
Annotation not available (363 aa)
     
  0.900
PP1S14_29V6.1
Predicted protein (362 aa)
     
  0.900
PP1S197_88V6.1
Annotation not available (378 aa)
     
  0.899
PP1S59_300V6.1
Predicted protein (403 aa)
     
  0.872
PP1S51_43V6.1
Annotation not available (395 aa)
     
  0.872
PP1S358_25V6.1
Predicted protein (411 aa)
     
  0.872
PP1S87_171V6.1
Predicted protein (448 aa)
     
  0.794
PP1S80_128V6.1
Predicted protein (470 aa)
     
  0.794
PP1S336_16V6.2
Predicted protein (597 aa)
     
  0.765
Your Current Organism:
Physcomitrella patens
NCBI taxonomy Id: 3218
Other names: Bryophyta, Bryophytina, Bryopsida, Funariaceae, Funariales, Funariidae, Moss Superclass V, Musci, P. patens, Physcomitrella, Physcomitrella Bruch & Schimp, Physcomitrella patens, Physcomitrella patens (Hedw.) Bruch & Schimp., Physcomitrium patens, Physcomitrium patens (Hedw.) Mitt., bryophytes, mosses
Server load: low (10%) [HD]