• Version:
  • 11.0 (preview - - version 10.5 still available here)
STRINGSTRING
PP1S124_25V6.1 protein (Physcomitrella patens) - STRING interaction network
"PP1S124_25V6.1" - Kinesin-like protein in Physcomitrella patens
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PP1S124_25V6.1Kinesin-like protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family (2593 aa)    
Predicted Functional Partners:
PP1S115_78V6.1
Predicted protein (760 aa)
           
  0.699
PP1S152_63V6.1
Intraflagellar transport protein IFT88 (867 aa)
     
 
  0.609
PP1S79_134V6.1
Predicted protein (495 aa)
     
   
  0.608
PP1S91_98V6.1
annotation not available (856 aa)
     
 
  0.588
PP1S222_3V6.1
annotation not available (857 aa)
     
   
  0.556
PP1S152_88V6.1
annotation not available (1174 aa)
     
   
  0.556
PP1S70_224V6.1
Intraflagellar transport protein IFT57 (431 aa)
     
   
  0.551
PP1S183_85V6.1
Predicted protein; Belongs to the protein kinase superfamily (293 aa)
     
 
  0.542
PP1S163_27V6.1
Predicted protein; Belongs to the protein kinase superfamily (293 aa)
     
 
  0.542
PP1S6_48V6.1
annotation not available (462 aa)
     
   
  0.541
Your Current Organism:
Physcomitrella patens
NCBI taxonomy Id: 3218
Other names: P. patens, Physcomitrella patens, Physcomitrella patens (Hedw.) Bruch & Schimp., Physcomitrella patens subsp. patens, Physcomitrium patens, Physcomitrium patens (Hedw.) Mitt.
Server load: low (6%) [HD]