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STRINGSTRING
PP1S125_91V6.1 protein (Physcomitrella patens) - STRING interaction network
"PP1S125_91V6.1" - Predicted protein in Physcomitrella patens
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PP1S125_91V6.1Predicted protein (137 aa)    
Predicted Functional Partners:
PP1S185_119V6.1
Predicted protein (264 aa)
   
        0.895
PP1S249_66V6.1
Predicted protein (152 aa)
     
        0.885
PP1S131_195V6.1
Predicted protein (98 aa)
     
        0.885
PP1S21_259V6.1
Peptidyl-prolyl cis-trans isomerase (112 aa)
   
 
  0.869
PP1S322_42V6.1
Predicted protein (97 aa)
     
        0.866
PP1S284_26V6.1
Uncharacterized protein (97 aa)
     
        0.866
PP1S80_34V6.1
annotation not available (847 aa)
   
   
  0.691
PP1S2_635V6.1
Predicted protein (190 aa)
     
 
  0.691
PP1S43_121V6.1
Predicted protein; Belongs to the protein kinase superfamily (408 aa)
       
 
  0.633
PP1S30_226V6.1
Uncharacterized protein; Belongs to the protein kinase superfamily (437 aa)
       
 
  0.633
Your Current Organism:
Physcomitrella patens
NCBI taxonomy Id: 3218
Other names: P. patens, Physcomitrella patens, Physcomitrella patens (Hedw.) Bruch & Schimp., Physcomitrella patens subsp. patens, Physcomitrium patens, Physcomitrium patens (Hedw.) Mitt.
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