STRINGSTRING
PP1S126_185V6.1 protein (Physcomitrella patens) - STRING interaction network
"PP1S126_185V6.1" - Predicted protein in Physcomitrella patens
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PP1S126_185V6.1Predicted protein (347 aa)    
Predicted Functional Partners:
PP1S76_39V6.1
Predicted protein (315 aa)
         
  0.910
PP1S39_342V6.1
Annotation not available (352 aa)
         
  0.910
PP1S2_737V6.1
Predicted protein (460 aa)
         
  0.910
PP1S200_22V6.1
Predicted protein (315 aa)
         
  0.910
PP1S62_126V6.1
Annotation not available (314 aa)
       
  0.907
PP1S40_134V6.1
Predicted protein (222 aa)
     
 
  0.904
PP1S32_349V6.1
Predicted protein (222 aa)
     
 
  0.904
Per1
Predicted protein (221 aa)
     
 
  0.904
PP1S56_54V6.1
Predicted protein; Removal of H(2)O(2), oxidation of toxic reductants, biosynthesis and degradation of lignin, suberization, auxin catabolism, response to environmental stresses such as wounding, pathogen attack and oxidative stress (395 aa)
         
  0.901
PP1S43_154V6.1
Predicted protein; Removal of H(2)O(2), oxidation of toxic reductants, biosynthesis and degradation of lignin, suberization, auxin catabolism, response to environmental stresses such as wounding, pathogen attack and oxidative stress (319 aa)
         
  0.901
Your Current Organism:
Physcomitrella patens
NCBI taxonomy Id: 3218
Other names: Bryophyta, Bryophytina, Bryopsida, Funariaceae, Funariales, Funariidae, Moss Superclass V, Musci, P. patens, Physcomitrella, Physcomitrella Bruch & Schimp, Physcomitrella patens, Physcomitrella patens (Hedw.) Bruch & Schimp., Physcomitrium patens, Physcomitrium patens (Hedw.) Mitt., bryophytes, mosses
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