• Version:
  • 11.0 (preview - - version 10.5 still available here)
STRINGSTRING
PP1S126_39V6.1 protein (Physcomitrella patens) - STRING interaction network
"PP1S126_39V6.1" - Predicted protein in Physcomitrella patens
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PP1S126_39V6.1Predicted protein (1055 aa)    
Predicted Functional Partners:
PP1S471_24V6.1
Predicted protein (350 aa)
         
  0.935
PP1S17_61V6.1
Predicted protein (420 aa)
         
  0.935
PP1S83_180V6.1
annotation not available (842 aa)
   
   
  0.932
PP1S68_292V6.1
Predicted protein; Belongs to the class I-like SAM-binding methyltransferase superfamily. RsmB/NOP family (441 aa)
   
   
  0.932
PP1S223_125V6.1
annotation not available (486 aa)
     
   
  0.928
PP1S19_315V6.1
DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates (1147 aa)
     
   
  0.917
PP1S7_96V6.1
Uncharacterized protein (1299 aa)
     
   
  0.894
PP1S147_5V6.1
annotation not available (465 aa)
     
   
  0.894
PP1S53_228V6.1
Predicted protein (849 aa)
     
   
  0.894
PP1S98_4V6.1
RNA helicase (625 aa)
   
      0.890
Your Current Organism:
Physcomitrella patens
NCBI taxonomy Id: 3218
Other names: P. patens, Physcomitrella patens, Physcomitrella patens (Hedw.) Bruch & Schimp., Physcomitrella patens subsp. patens, Physcomitrium patens, Physcomitrium patens (Hedw.) Mitt.
Server load: low (8%) [HD]