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STRINGSTRING
PP1S126_64V6.1 protein (Physcomitrella patens) - STRING interaction network
"PP1S126_64V6.1" - Predicted protein in Physcomitrella patens
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PP1S126_64V6.1Predicted protein (517 aa)    
Predicted Functional Partners:
PP1S6_191V6.1
Predicted protein (514 aa)
     
        0.885
PP1S263_30V6.1
Predicted protein (549 aa)
     
        0.885
PP1S191_76V6.1
Predicted protein (344 aa)
     
        0.883
PP1S89_68V6.1
Predicted protein (198 aa)
     
        0.874
PP1S206_16V6.1
annotation not available (286 aa)
     
        0.874
PP1S11_10V6.1
annotation not available (806 aa)
     
        0.857
PP1S83_83V6.1
Predicted protein (225 aa)
   
 
  0.841
PP1S24_200V6.1
Predicted protein (226 aa)
   
 
  0.841
PP1S6496_2V6.1
Predicted protein (206 aa)
         
  0.709
PP1S240_88V6.1
annotation not available (467 aa)
         
  0.641
Your Current Organism:
Physcomitrella patens
NCBI taxonomy Id: 3218
Other names: P. patens, Physcomitrella patens, Physcomitrella patens (Hedw.) Bruch & Schimp., Physcomitrella patens subsp. patens, Physcomitrium patens, Physcomitrium patens (Hedw.) Mitt.
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