STRINGSTRING
PP1S127_123V6.2 protein (Physcomitrella patens) - STRING interaction network
"PP1S127_123V6.2" - Predicted protein in Physcomitrella patens
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PP1S127_123V6.2Predicted protein (583 aa)    
Predicted Functional Partners:
PP1S8_81V6.1
Predicted protein (170 aa)
     
 
  0.966
PP1S8_80V6.1
Predicted protein (306 aa)
     
 
  0.966
PP1S6_137V6.1
Annotation not available (527 aa)
     
 
  0.966
PP1S6_129V6.1
Annotation not available (483 aa)
     
 
  0.966
PP1S18_87V6.1
Annotation not available (423 aa)
     
 
  0.966
PP1S30_111V6.1
Predicted protein (245 aa)
       
  0.933
PP1S38_83V6.1
Annotation not available (1219 aa)
     
 
  0.933
PP1S22_343V6.1
Annotation not available (1227 aa)
     
      0.931
PP1S314_28V6.1
Predicted protein (925 aa)
     
      0.930
PP1S414_22V6.1
Predicted protein (903 aa)
     
 
  0.924
Your Current Organism:
Physcomitrella patens
NCBI taxonomy Id: 3218
Other names: Bryophyta, Bryophytina, Bryopsida, Funariaceae, Funariales, Funariidae, Moss Superclass V, Musci, P. patens, Physcomitrella, Physcomitrella Bruch & Schimp, Physcomitrella patens, Physcomitrella patens (Hedw.) Bruch & Schimp., Physcomitrium patens, Physcomitrium patens (Hedw.) Mitt., bryophytes, mosses
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