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STRINGSTRING
PP1S128_117V6.1 protein (Physcomitrella patens) - STRING interaction network
"PP1S128_117V6.1" - Predicted protein in Physcomitrella patens
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PP1S128_117V6.1Predicted protein (721 aa)    
Predicted Functional Partners:
PP1S43_234V6.1
Predicted protein (739 aa)
     
   
  0.930
psbH
Photosystem II reaction center protein H; One of the components of the core complex of photosystem II (PSII), required for its stability and/or assembly. PSII is a light-driven water-plastoquinone oxidoreductase that uses light energy to abstract electrons from H(2)O, generating O(2) and a proton gradient subsequently used for ATP formation. It consists of a core antenna complex that captures photons, and an electron transfer chain that converts photonic excitation into a charge separation; Belongs to the PsbH family (74 aa)
           
  0.889
petD
Cytochrome b6-f complex subunit 4; Component of the cytochrome b6-f complex, which mediates electron transfer between photosystem II (PSII) and photosystem I (PSI), cyclic electron flow around PSI, and state transitions (97 aa)
       
 
  0.887
petB
Cytochrome b6; Component of the cytochrome b6-f complex, which mediates electron transfer between photosystem II (PSII) and photosystem I (PSI), cyclic electron flow around PSI, and state transitions (162 aa)
       
 
  0.876
psbT
Predicted protein; Photosystem II reaction center protein T (230 aa)
           
  0.783
PP1S42_203V6.1
Predicted protein (5188 aa)
           
  0.695
PP1S31_210V6.1
Predicted protein (5199 aa)
           
  0.695
HEN1501
HEN1 protein (1021 aa)
           
  0.626
PP1S12_74V6.1
annotation not available (1719 aa)
           
  0.607
PP1S73_28V6.1
annotation not available (1658 aa)
     
   
  0.581
Your Current Organism:
Physcomitrella patens
NCBI taxonomy Id: 3218
Other names: P. patens, Physcomitrella patens, Physcomitrella patens (Hedw.) Bruch & Schimp., Physcomitrella patens subsp. patens, Physcomitrium patens, Physcomitrium patens (Hedw.) Mitt.
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