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PP1S128_133V6.1 protein (Physcomitrella patens) - STRING interaction network
"PP1S128_133V6.1" - Predicted protein in Physcomitrella patens
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PP1S128_133V6.1Predicted protein; Belongs to the oxygen-dependent FAD-linked oxidoreductase family (501 aa)    
Predicted Functional Partners:
PP1S42_259V6.2
annotation not available (585 aa)
         
  0.587
PP1S301_54V6.1
Predicted protein (589 aa)
         
  0.587
PP1S167_52V6.2
annotation not available (592 aa)
         
  0.587
PHR1
PHR1 AtPHR1-like type 2 CPD DNA photolyase (674 aa)
   
 
  0.575
PP1S206_83V6.2
Predicted protein (365 aa)
         
  0.558
PP1S206_68V6.1
annotation not available (186 aa)
         
  0.558
PP1S58_147V6.1
annotation not available (1356 aa)
         
  0.542
PP1S316_5V6.1
annotation not available (457 aa)
         
  0.528
PP1S155_80V6.1
Predicted protein (164 aa)
         
  0.528
PP1S91_93V6.1
Predicted protein (218 aa)
           
  0.523
Your Current Organism:
Physcomitrella patens
NCBI taxonomy Id: 3218
Other names: P. patens, Physcomitrella patens, Physcomitrella patens (Hedw.) Bruch & Schimp., Physcomitrella patens subsp. patens, Physcomitrium patens, Physcomitrium patens (Hedw.) Mitt.
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