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PP1S129_145V6.1 protein (Physcomitrella patens) - STRING interaction network
"PP1S129_145V6.1" - H/ACA ribonucleoprotein complex subunit in Physcomitrella patens
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
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Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PP1S129_145V6.1H/ACA ribonucleoprotein complex subunit; Required for ribosome biogenesis. Part of a complex which catalyzes pseudouridylation of rRNA. This involves the isomerization of uridine such that the ribose is subsequently attached to C5, instead of the normal N1 (206 aa)    
Predicted Functional Partners:
PP1S300_44V6.1
Predicted protein (64 aa)
     
 
  0.995
PP1S66_289V6.1
Predicted protein (157 aa)
     
 
  0.994
PP1S131_177V6.1
Predicted protein (157 aa)
     
 
  0.994
PP1S251_19V6.1
Predicted protein (557 aa)
     
 
  0.992
PP1S251_17V6.1
annotation not available (557 aa)
     
 
  0.992
PP1S165_132V6.1
Predicted protein (569 aa)
     
 
  0.992
PP1S65_29V6.1
Predicted protein (128 aa)
     
 
  0.974
PP1S65_24V6.1
Predicted protein (128 aa)
     
 
  0.974
PP1S40_7V6.1
annotation not available (196 aa)
     
 
  0.974
PP1S34_345V6.1
Predicted protein (128 aa)
     
 
  0.974
Your Current Organism:
Physcomitrella patens
NCBI taxonomy Id: 3218
Other names: P. patens, Physcomitrella patens, Physcomitrella patens (Hedw.) Bruch & Schimp., Physcomitrella patens subsp. patens, Physcomitrium patens, Physcomitrium patens (Hedw.) Mitt.
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