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STRINGSTRING
PP1S12_189V6.2 protein (Physcomitrella patens) - STRING interaction network
"PP1S12_189V6.2" - Predicted protein in Physcomitrella patens
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PP1S12_189V6.2Predicted protein (333 aa)    
Predicted Functional Partners:
PP1S80_95V6.1
annotation not available (133 aa)
     
   
  0.907
PP1S44_228V6.1
annotation not available (465 aa)
     
   
  0.892
PP1S191_74V6.1
Elongation factor Tu; This protein promotes the GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis (464 aa)
     
   
  0.892
PP1S16_25V6.1
annotation not available (465 aa)
     
   
  0.892
PP1S147_111V6.1
annotation not available (260 aa)
     
   
  0.892
PP1S147_109V6.1
Elongation factor Tu; This protein promotes the GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis (475 aa)
     
   
  0.892
PP1S147_106V6.1
Elongation factor Tu; This protein promotes the GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis (475 aa)
     
   
  0.892
PP1S381_17V6.1
Predicted protein (527 aa)
     
   
  0.887
PP1S332_22V6.1
Predicted protein (419 aa)
     
   
  0.887
PP1S198_153V6.2
Predicted protein (528 aa)
     
   
  0.887
Your Current Organism:
Physcomitrella patens
NCBI taxonomy Id: 3218
Other names: P. patens, Physcomitrella patens, Physcomitrella patens (Hedw.) Bruch & Schimp., Physcomitrella patens subsp. patens, Physcomitrium patens, Physcomitrium patens (Hedw.) Mitt.
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