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STRINGSTRING
PP1S12_192V6.1 protein (Physcomitrella patens) - STRING interaction network
"PP1S12_192V6.1" - Predicted protein in Physcomitrella patens
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PP1S12_192V6.1Predicted protein (545 aa)    
Predicted Functional Partners:
PP1S158_108V6.2
Predicted protein (328 aa)
 
 
  0.998
PP1S55_196V6.1
Amidophosphoribosyltransferase (623 aa)
 
  0.997
PP1S8_239V6.1
Amidophosphoribosyltransferase (590 aa)
 
  0.997
PP1S386_21V6.1
Predicted protein (1428 aa)
 
 
  0.992
PP1S11531_1V6.1
Predicted protein (300 aa)
   
 
  0.992
PP1S9537_1V6.1
Predicted protein (197 aa)
   
 
  0.990
PP1S78_3V6.2
Adenylosuccinate lyase; Belongs to the lyase 1 family. Adenylosuccinate lyase subfamily (547 aa)
   
 
  0.990
PP1S10_57V6.1
Predicted protein; Phosphoribosylaminoimidazole-succinocarboxamide synthase (431 aa)
 
 
  0.987
PP1S135_25V6.1
Predicted protein (598 aa)
 
  0.983
PP1S372_60V6.1
Predicted protein (628 aa)
 
 
  0.975
Your Current Organism:
Physcomitrella patens
NCBI taxonomy Id: 3218
Other names: P. patens, Physcomitrella patens, Physcomitrella patens (Hedw.) Bruch & Schimp., Physcomitrella patens subsp. patens, Physcomitrium patens, Physcomitrium patens (Hedw.) Mitt.
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