STRINGSTRING
PP1S12_28V6.1 protein (Physcomitrella patens) - STRING interaction network
"PP1S12_28V6.1" - Predicted protein in Physcomitrella patens
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PP1S12_28V6.1Predicted protein (348 aa)    
Predicted Functional Partners:
PP1S269_25V6.1
Predicted protein (616 aa)
         
  0.944
PP1S2_146V6.1
Predicted protein (204 aa)
         
  0.907
PP1S94_154V6.1
Predicted protein (321 aa)
         
    0.900
PP1S386_19V6.1
Predicted protein (987 aa)
         
  0.814
PP1S15_465V6.1
Predicted protein (1002 aa)
         
  0.814
PP1S33_65V6.1
Predicted protein (312 aa)
         
    0.800
PP1S317_21V6.1
Predicted protein (679 aa)
         
    0.800
PP1S16_66V6.1
Annotation not available (509 aa)
         
    0.800
PP1S106_48V6.1
Predicted protein (695 aa)
         
    0.800
PP1S156_77V6.1
Annotation not available (426 aa)
           
  0.504
Your Current Organism:
Physcomitrella patens
NCBI taxonomy Id: 3218
Other names: Bryophyta, Bryophytina, Bryopsida, Funariaceae, Funariales, Funariidae, Moss Superclass V, Musci, P. patens, Physcomitrella, Physcomitrella Bruch & Schimp, Physcomitrella patens, Physcomitrella patens (Hedw.) Bruch & Schimp., Physcomitrium patens, Physcomitrium patens (Hedw.) Mitt., bryophytes, mosses
Server load: low (7%) [HD]