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STRINGSTRING
ppabcg15 protein (Physcomitrella patens) - STRING interaction network
"ppabcg15" - annotation not available in Physcomitrella patens
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ppabcg15annotation not available (1472 aa)    
Predicted Functional Partners:
PP1S389_18V6.2
Predicted protein (224 aa)
           
  0.591
PP1S2_225V6.1
Predicted protein (215 aa)
           
  0.591
ppabcb13
ATP-binding cassette transporter, subfamily B, member 13, group MDR/PGP protein PpABCB13 (1284 aa)
   
 
  0.565
ppabcb14
ATP-binding cassette transporter, subfamily B, member 14, group MDR/PGP protein PpABCB14 (1292 aa)
   
 
  0.565
ppabcd7
ATP-binding cassette transporter, subfamily D, member 7, group PMP protein PpABCD7 (1070 aa)
     
   
  0.500
ppabcd2
annotation not available (835 aa)
     
   
  0.500
PP1S85_39V6.1
annotation not available (595 aa)
     
 
  0.443
PP1S19_126V6.1
annotation not available (130 aa)
     
 
  0.443
ppabcb18
annotation not available (1321 aa)
   
 
  0.412
Your Current Organism:
Physcomitrella patens
NCBI taxonomy Id: 3218
Other names: P. patens, Physcomitrella patens, Physcomitrella patens (Hedw.) Bruch & Schimp., Physcomitrella patens subsp. patens, Physcomitrium patens, Physcomitrium patens (Hedw.) Mitt.
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