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TLP1A protein (Physcomitrella patens) - STRING interaction network
TLP1A TIR1-like auxin receptor protein in Physcomitrella patens
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TLP1ATLP1A TIR1-like auxin receptor protein (693 aa)    
Predicted Functional Partners:
PpIAA1b
Auxin-responsive protein; Aux/IAA proteins are short-lived transcriptional factors that function as repressors of early auxin response genes at low auxin concentrations (503 aa)
         
    0.800
PP1S131_128V6.1
Predicted protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family (1118 aa)
     
 
  0.688
PP1S88_186V6.1
Predicted protein (1189 aa)
     
      0.553
PP1S81_123V6.1
Predicted protein (1194 aa)
     
      0.553
PP1S9_292V6.1
annotation not available (158 aa)
       
 
  0.553
PP1S7_342V6.1
Uncharacterized protein; Belongs to the SKP1 family (157 aa)
       
 
  0.553
PP1S49_174V6.1
Predicted protein; Belongs to the SKP1 family (109 aa)
       
 
  0.553
PP1S48_35V6.1
annotation not available (71 aa)
       
 
  0.553
PP1S28_148V6.1
Uncharacterized protein; Belongs to the SKP1 family (157 aa)
       
 
  0.553
PP1S116_97V6.1
annotation not available (92 aa)
       
 
  0.553
Your Current Organism:
Physcomitrella patens
NCBI taxonomy Id: 3218
Other names: P. patens, Physcomitrella patens, Physcomitrella patens (Hedw.) Bruch & Schimp., Physcomitrella patens subsp. patens, Physcomitrium patens, Physcomitrium patens (Hedw.) Mitt.
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