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STRINGSTRING
PP1S12_3V6.1 protein (Physcomitrella patens) - STRING interaction network
"PP1S12_3V6.1" - annotation not available in Physcomitrella patens
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PP1S12_3V6.1annotation not available (311 aa)    
Predicted Functional Partners:
PP1S98_14V6.1
Predicted protein (816 aa)
           
  0.557
PP1S84_299V6.1
Predicted protein (774 aa)
           
  0.557
MKN2
KNOX class 1 protein MKN2 (445 aa)
     
   
  0.518
MKN5
KNOX class 1 protein MKN5 (508 aa)
     
   
  0.518
MKN6
KNOX class 2 protein MKN6 (518 aa)
           
  0.516
MKN1-3
KNOX class 2 protein MKN1-3 (636 aa)
           
  0.516
PP1S403_39V6.1
Eukaryotic translation initiation factor 6; Binds to the 60S ribosomal subunit and prevents its association with the 40S ribosomal subunit to form the 80S initiation complex in the cytoplasm. May also be involved in ribosome biogenesis (245 aa)
           
  0.470
PP1S222_58V6.1
Eukaryotic translation initiation factor 6; Binds to the 60S ribosomal subunit and prevents its association with the 40S ribosomal subunit to form the 80S initiation complex in the cytoplasm. May also be involved in ribosome biogenesis (245 aa)
           
  0.470
PP1S65_42V6.1
Predicted protein (350 aa)
       
 
  0.424
PP1S34_327V6.1
Predicted protein (357 aa)
       
 
  0.424
Your Current Organism:
Physcomitrella patens
NCBI taxonomy Id: 3218
Other names: P. patens, Physcomitrella patens, Physcomitrella patens (Hedw.) Bruch & Schimp., Physcomitrella patens subsp. patens, Physcomitrium patens, Physcomitrium patens (Hedw.) Mitt.
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