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PP1S12_60V6.1 protein (Physcomitrella patens) - STRING interaction network
"PP1S12_60V6.1" - Predicted protein in Physcomitrella patens
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PP1S12_60V6.1Predicted protein; Belongs to the small Tim family (77 aa)    
Predicted Functional Partners:
PP1S28_170V6.1
Uncharacterized protein (85 aa)
     
 
  0.997
PP1S9_158V6.1
annotation not available (90 aa)
     
 
  0.993
PP1S178_121V6.1
Predicted protein; Belongs to the small Tim family (90 aa)
     
 
  0.993
PP1S168_35V6.1
Predicted protein; Belongs to the small Tim family (89 aa)
     
 
0.985
PP1S389_51V6.1
Predicted protein (197 aa)
     
 
  0.962
PP1S389_49V6.1
Predicted protein (197 aa)
     
 
  0.962
PP1S379_37V6.1
Predicted protein (111 aa)
     
 
  0.961
PP1S18_313V6.1
Predicted protein (109 aa)
     
 
  0.961
PP1S249_66V6.1
Predicted protein (152 aa)
     
   
  0.932
PP1S152_64V6.1
50S ribosomal protein L20; Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit (113 aa)
     
   
  0.900
Your Current Organism:
Physcomitrella patens
NCBI taxonomy Id: 3218
Other names: P. patens, Physcomitrella patens, Physcomitrella patens (Hedw.) Bruch & Schimp., Physcomitrella patens subsp. patens, Physcomitrium patens, Physcomitrium patens (Hedw.) Mitt.
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