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STRINGSTRING
PP1S12_62V6.1 protein (Physcomitrella patens) - STRING interaction network
"PP1S12_62V6.1" - Predicted protein in Physcomitrella patens
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PP1S12_62V6.1Predicted protein (294 aa)    
Predicted Functional Partners:
PP1S282_60V6.2
annotation not available (544 aa)
           
  0.530
PHY5c
Phytochrome; Regulatory photoreceptor which exists in two forms that are reversibly interconvertible by light- the Pr form that absorbs maximally in the red region of the spectrum and the Pfr form that absorbs maximally in the far-red region (1124 aa)
   
 
 
  0.523
PP1S79_76V6.2
Nitrate reductase; Nitrate reductase is a key enzyme involved in the first step of nitrate assimilation in plants, fungi and bacteria (892 aa)
           
  0.521
Nia1
Nitrate reductase; Nitrate reductase is a key enzyme involved in the first step of nitrate assimilation in plants, fungi and bacteria (891 aa)
           
  0.521
PP1S58_249V6.1
Nitrate reductase; Nitrate reductase is a key enzyme involved in the first step of nitrate assimilation in plants, fungi and bacteria (891 aa)
           
  0.521
PP1S333_32V6.1
annotation not available (803 aa)
           
  0.519
CKI3c
CKI3a AtCKI1/2-like cytokinin receptor (1020 aa)
   
   
  0.502
PP1S203_100V6.1
Sensory histidine protein kinase (1010 aa)
   
   
  0.501
PP1S71_181V6.1
Predicted protein (1062 aa)
   
   
  0.500
PP1S43_207V6.1
annotation not available (1048 aa)
   
   
  0.495
Your Current Organism:
Physcomitrella patens
NCBI taxonomy Id: 3218
Other names: P. patens, Physcomitrella patens, Physcomitrella patens (Hedw.) Bruch & Schimp., Physcomitrella patens subsp. patens, Physcomitrium patens, Physcomitrium patens (Hedw.) Mitt.
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