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STRINGSTRING
PP1S12_85V6.2 protein (Physcomitrella patens) - STRING interaction network
"PP1S12_85V6.2" - Predicted protein in Physcomitrella patens
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PP1S12_85V6.2Predicted protein (249 aa)    
Predicted Functional Partners:
PP1S3_208V6.1
annotation not available (988 aa)
       
 
  0.850
PP1S27_248V6.1
Predicted protein; Belongs to the ClpA/ClpB family (986 aa)
       
 
  0.850
PP1S136_9V6.1
Predicted protein (350 aa)
     
   
  0.838
PP1S81_62V6.1
ATP-dependent Clp protease proteolytic subunit ; Belongs to the peptidase S14 family (393 aa)
   
 
  0.802
PP1S340_20V6.1
ATP-dependent Clp protease proteolytic subunit ; Belongs to the peptidase S14 family (393 aa)
   
 
  0.802
PP1S102_15V6.1
ATP-dependent Clp protease proteolytic subunit (250 aa)
   
 
  0.802
PP1S36_137V6.1
ATP-dependent Clp protease proteolytic subunit (314 aa)
   
 
  0.763
PP1S173_102V6.1
ATP-dependent Clp protease proteolytic subunit (313 aa)
   
 
  0.763
PP1S161_14V6.1
ATP-dependent Clp protease proteolytic subunit ; Belongs to the peptidase S14 family (288 aa)
   
 
  0.759
PP1S128_154V6.2
ATP-dependent Clp protease proteolytic subunit; Belongs to the peptidase S14 family (297 aa)
   
 
  0.759
Your Current Organism:
Physcomitrella patens
NCBI taxonomy Id: 3218
Other names: P. patens, Physcomitrella patens, Physcomitrella patens (Hedw.) Bruch & Schimp., Physcomitrella patens subsp. patens, Physcomitrium patens, Physcomitrium patens (Hedw.) Mitt.
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