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STRINGSTRING
PP1S130_271V6.1 protein (Physcomitrella patens) - STRING interaction network
"PP1S130_271V6.1" - annotation not available in Physcomitrella patens
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PP1S130_271V6.1annotation not available (151 aa)    
Predicted Functional Partners:
PP1S4_436V6.2
Inner dynein arm I1 intermediate chain IC138 (350 aa)
     
 
  0.951
PP1S226_27V6.2
Inner dynein arm I1 intermediate chain IC140 (530 aa)
     
 
  0.951
PP1S178_134V6.1
Dynein light chain TCTEX1 (106 aa)
     
 
  0.927
PP1S233_14V6.1
Inner dynein arm light chain (245 aa)
     
   
  0.806
PP1S197_53V6.2
annotation not available (484 aa)
           
  0.761
PP1S13_215V6.1
Predicted protein (434 aa)
     
   
  0.668
PP1S465_5V6.1
annotation not available (1762 aa)
     
   
  0.636
PP1S173_97V6.1
Radial spoke protein 9 (349 aa)
     
   
  0.632
PP1S6_275V6.1
Predicted protein (112 aa)
     
 
  0.620
PP1S61_117V6.1
Predicted protein (116 aa)
     
 
  0.620
Your Current Organism:
Physcomitrella patens
NCBI taxonomy Id: 3218
Other names: P. patens, Physcomitrella patens, Physcomitrella patens (Hedw.) Bruch & Schimp., Physcomitrella patens subsp. patens, Physcomitrium patens, Physcomitrium patens (Hedw.) Mitt.
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