STRINGSTRING
PP1S130_43V6.1 protein (Physcomitrella patens) - STRING interaction network
"PP1S130_43V6.1" - Annotation not available in Physcomitrella patens
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PP1S130_43V6.1Annotation not available (1233 aa)    
Predicted Functional Partners:
PP1S52_244V6.1
Annotation not available (694 aa)
   
 
  0.948
PP1S149_266V6.1
Beta-galactosidase (690 aa)
   
 
  0.948
PP1S141_30V6.1
Predicted protein; Converts alpha-aldose to the beta-anomer (364 aa)
       
  0.945
hxk5
Hexokinase protein HXK5 (522 aa)
         
  0.909
hxk6
Hexokinase protein HXK6 (519 aa)
         
  0.909
hxk4
Hexokinase protein HXK4 (489 aa)
         
  0.909
hxk2
Hexokinase protein HXK2 (521 aa)
         
  0.909
hxk3
Hexokinase protein HXK3 (517 aa)
         
  0.909
hxk8
Hexokinase protein HXK8 (517 aa)
         
  0.909
hxk11
Hexokinase protein HXK11 (517 aa)
         
  0.909
Your Current Organism:
Physcomitrella patens
NCBI taxonomy Id: 3218
Other names: Bryophyta, Bryophytina, Bryopsida, Funariaceae, Funariales, Funariidae, Moss Superclass V, Musci, P. patens, Physcomitrella, Physcomitrella Bruch & Schimp, Physcomitrella patens, Physcomitrella patens (Hedw.) Bruch & Schimp., Physcomitrium patens, Physcomitrium patens (Hedw.) Mitt., bryophytes, mosses
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