STRINGSTRING
PP1S131_32V6.1 protein (Physcomitrella patens) - STRING interaction network
"PP1S131_32V6.1" - Predicted protein in Physcomitrella patens
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PP1S131_32V6.1Predicted protein (358 aa)    
Predicted Functional Partners:
PP1S59_345V6.1
Predicted protein (423 aa)
     
 
    0.907
PP1S36_284V6.1
Predicted protein (388 aa)
     
 
    0.907
PP1S277_57V6.1
Predicted protein (425 aa)
     
 
    0.907
PP1S165_63V6.1
Predicted protein (427 aa)
     
 
    0.907
PP1S2_146V6.1
Predicted protein (204 aa)
         
    0.900
PP1S269_25V6.1
Predicted protein (616 aa)
         
    0.900
PP1S386_23V6.1
Annotation not available (52 aa)
   
          0.439
PP1S193_16V6.1
Predicted protein; Catalyzes xyloglucan endohydrolysis (XEH) and/or endotransglycosylation (XET). Cleaves and religates xyloglucan polymers, an essential constituent of the primary cell wall, and thereby participates in cell wall construction of growing tissues (345 aa)
           
  0.407
PP1S117_71V6.1
Annotation not available (942 aa)
           
  0.407
Your Current Organism:
Physcomitrella patens
NCBI taxonomy Id: 3218
Other names: Bryophyta, Bryophytina, Bryopsida, Funariaceae, Funariales, Funariidae, Moss Superclass V, Musci, P. patens, Physcomitrella, Physcomitrella Bruch & Schimp, Physcomitrella patens, Physcomitrella patens (Hedw.) Bruch & Schimp., Physcomitrium patens, Physcomitrium patens (Hedw.) Mitt., bryophytes, mosses
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