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  • 11.0 (preview - - version 10.5 still available here)
STRINGSTRING
PP1S132_172V6.1 protein (Physcomitrella patens) - STRING interaction network
"PP1S132_172V6.1" - annotation not available in Physcomitrella patens
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PP1S132_172V6.1annotation not available (1246 aa)    
Predicted Functional Partners:
PP1S127_73V6.1
Predicted protein (747 aa)
     
   
  0.999
PP1S117_81V6.1
Predicted protein (341 aa)
     
 
  0.903
PP1S92_104V6.1
Predicted protein; Belongs to the WD repeat SEC13 family (311 aa)
         
  0.901
PP1S301_43V6.1
Predicted protein; Belongs to the WD repeat SEC13 family (307 aa)
         
  0.901
PP1S175_135V6.1
Predicted protein; Belongs to the WD repeat SEC13 family (310 aa)
         
  0.901
PP1S100_118V6.2
Predicted protein; Belongs to the WD repeat SEC13 family (306 aa)
         
  0.901
PP1S114_56V6.1
Predicted protein (1137 aa)
     
   
  0.896
PP1S229_66V6.1
Predicted protein; Belongs to the WD repeat SEC13 family (334 aa)
           
  0.888
PP1S58_203V6.1
Predicted protein (426 aa)
     
        0.885
PP1S21_126V6.1
Predicted protein (433 aa)
     
        0.885
Your Current Organism:
Physcomitrella patens
NCBI taxonomy Id: 3218
Other names: P. patens, Physcomitrella patens, Physcomitrella patens (Hedw.) Bruch & Schimp., Physcomitrella patens subsp. patens, Physcomitrium patens, Physcomitrium patens (Hedw.) Mitt.
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