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STRINGSTRING
PP1S132_191V6.1 protein (Physcomitrella patens) - STRING interaction network
"PP1S132_191V6.1" - Predicted protein in Physcomitrella patens
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PP1S132_191V6.1Predicted protein (734 aa)    
Predicted Functional Partners:
PP1S22_49V6.1
Predicted protein (405 aa)
           
  0.693
PP1S312_13V6.1
annotation not available (812 aa)
           
  0.596
PP1S69_64V6.1
Predicted protein (454 aa)
           
  0.581
PP1S114_3V6.1
Predicted protein (600 aa)
           
  0.579
PP1S134_60V6.1
Predicted protein (386 aa)
           
  0.573
PP1S75_30V6.1
Predicted protein (499 aa)
           
  0.572
PP1S31_233V6.3
Predicted protein (533 aa)
           
  0.542
PP1S114_166V6.1
Predicted protein (434 aa)
           
  0.542
PP1S101_160V6.1
Predicted protein (425 aa)
           
  0.542
PP1S92_48V6.1
annotation not available (374 aa)
           
  0.538
Your Current Organism:
Physcomitrella patens
NCBI taxonomy Id: 3218
Other names: P. patens, Physcomitrella patens, Physcomitrella patens (Hedw.) Bruch & Schimp., Physcomitrella patens subsp. patens, Physcomitrium patens, Physcomitrium patens (Hedw.) Mitt.
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