STRINGSTRING
PP1S132_58V6.1 protein (Physcomitrella patens) - STRING interaction network
"PP1S132_58V6.1" - Annotation not available in Physcomitrella patens
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PP1S132_58V6.1Annotation not available (475 aa)    
Predicted Functional Partners:
PP1S212_89V6.1
Annotation not available (530 aa)
     
 
0.721
PP1S29_327V6.1
Predicted protein (582 aa)
     
 
0.719
PP1S38_279V6.1
Predicted protein (548 aa)
     
 
0.718
PP1S248_102V6.1
Annotation not available (564 aa)
     
 
0.718
PP1S7_8V6.1
Predicted protein (349 aa)
     
 
  0.680
PP1S28_193V6.1
Uncharacterized protein (355 aa)
     
 
  0.680
PP1S173_12V6.1
Annotation not available (333 aa)
     
 
  0.680
PP1S69_23V6.1
Annotation not available (464 aa)
     
 
  0.669
PP1S65_286V6.1
Annotation not available (346 aa)
     
 
  0.669
RS27
Predicted protein (233 aa)
     
 
  0.665
Your Current Organism:
Physcomitrella patens
NCBI taxonomy Id: 3218
Other names: Bryophyta, Bryophytina, Bryopsida, Funariaceae, Funariales, Funariidae, Moss Superclass V, Musci, P. patens, Physcomitrella, Physcomitrella Bruch & Schimp, Physcomitrella patens, Physcomitrella patens (Hedw.) Bruch & Schimp., Physcomitrium patens, Physcomitrium patens (Hedw.) Mitt., bryophytes, mosses
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