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STRINGSTRING
PP1S132_59V6.1 protein (Physcomitrella patens) - STRING interaction network
"PP1S132_59V6.1" - Predicted protein in Physcomitrella patens
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PP1S132_59V6.1Predicted protein (218 aa)    
Predicted Functional Partners:
PP1S78_15V6.1
Predicted protein (210 aa)
     
 
0.986
PP1S314_30V6.1
Predicted protein (210 aa)
     
 
0.985
PP1S367_2V6.2
Eukaryotic translation initiation factor 3 subunit L; Component of the eukaryotic translation initiation factor 3 (eIF-3) complex, which is involved in protein synthesis of a specialized repertoire of mRNAs and, together with other initiation factors, stimulates binding of mRNA and methionyl-tRNAi to the 40S ribosome. The eIF-3 complex specifically targets and initiates translation of a subset of mRNAs involved in cell proliferation (531 aa)
     
        0.732
PP1S216_68V6.1
Eukaryotic translation initiation factor 3 subunit L; Component of the eukaryotic translation initiation factor 3 (eIF-3) complex, which is involved in protein synthesis of a specialized repertoire of mRNAs and, together with other initiation factors, stimulates binding of mRNA and methionyl-tRNAi to the 40S ribosome. The eIF-3 complex specifically targets and initiates translation of a subset of mRNAs involved in cell proliferation (531 aa)
     
        0.732
PP1S39_62V6.1
annotation not available (478 aa)
     
 
  0.559
PP1S241_93V6.1
Predicted protein; Belongs to the cytochrome b5 family (211 aa)
     
   
  0.541
PP1S323_56V6.1
Predicted protein; Belongs to the SecY/SEC61-alpha family (477 aa)
     
 
  0.535
PP1S114_48V6.1
Predicted protein; Belongs to the SecY/SEC61-alpha family (477 aa)
     
 
  0.535
PP1S399_23V6.1
Predicted protein (349 aa)
     
   
  0.533
PP1S25_30V6.1
Predicted protein (339 aa)
     
   
  0.533
Your Current Organism:
Physcomitrella patens
NCBI taxonomy Id: 3218
Other names: P. patens, Physcomitrella patens, Physcomitrella patens (Hedw.) Bruch & Schimp., Physcomitrella patens subsp. patens, Physcomitrium patens, Physcomitrium patens (Hedw.) Mitt.
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