• Version:
  • 11.0 (preview - - version 10.5 still available here)
STRINGSTRING
PP1S133_103V6.1 protein (Physcomitrella patens) - STRING interaction network
"PP1S133_103V6.1" - Histone H4 in Physcomitrella patens
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PP1S133_103V6.1Histone H4; Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling (199 aa)    
Predicted Functional Partners:
PP1S206_32V6.1
Predicted protein (523 aa)
     
 
  0.925
PP1S220_98V6.1
annotation not available (599 aa)
     
 
  0.923
GTC1501
FACT complex subunit (1060 aa)
     
 
  0.923
HTA1501
Histone H2A (145 aa)
     
 
  0.919
HTA1506
Histone H2A (144 aa)
     
 
  0.919
HTA1502
Histone H2A (145 aa)
     
 
  0.919
PP1S90_96V6.1
Predicted protein (1020 aa)
     
 
  0.919
PP1S213_95V6.1
annotation not available (308 aa)
       
 
  0.918
RUVBL1502
Predicted protein (1320 aa)
       
 
  0.915
PP1S61_39V6.1
Predicted protein (2124 aa)
     
 
  0.914
Your Current Organism:
Physcomitrella patens
NCBI taxonomy Id: 3218
Other names: P. patens, Physcomitrella patens, Physcomitrella patens (Hedw.) Bruch & Schimp., Physcomitrella patens subsp. patens, Physcomitrium patens, Physcomitrium patens (Hedw.) Mitt.
Server load: low (6%) [HD]