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STRINGSTRING
PP1S133_107V6.1 protein (Physcomitrella patens) - STRING interaction network
"PP1S133_107V6.1" - Predicted protein in Physcomitrella patens
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PP1S133_107V6.1Predicted protein (237 aa)    
Predicted Functional Partners:
PP1S157_76V6.3
Predicted protein (164 aa)
     
   
  0.885
PP1S13_21V6.3
Predicted protein (164 aa)
     
   
  0.885
PP1S13_127V6.2
Predicted protein; Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family (558 aa)
   
 
  0.742
PP1S116_56V6.2
Predicted protein; Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family (498 aa)
   
 
  0.742
PP1S9_92V6.1
annotation not available (566 aa)
   
 
  0.707
PP1S455_2V6.1
Thioredoxin reductase ; Belongs to the class-II pyridine nucleotide-disulfide oxidoreductase family (573 aa)
   
 
  0.707
PP1S153_74V6.1
Predicted protein (133 aa)
     
 
  0.640
PP1S31_128V6.1
Predicted protein (198 aa)
     
 
  0.639
PP1S79_76V6.2
Nitrate reductase; Nitrate reductase is a key enzyme involved in the first step of nitrate assimilation in plants, fungi and bacteria (892 aa)
   
 
  0.608
Nia1
Nitrate reductase; Nitrate reductase is a key enzyme involved in the first step of nitrate assimilation in plants, fungi and bacteria (891 aa)
   
 
  0.608
Your Current Organism:
Physcomitrella patens
NCBI taxonomy Id: 3218
Other names: P. patens, Physcomitrella patens, Physcomitrella patens (Hedw.) Bruch & Schimp., Physcomitrella patens subsp. patens, Physcomitrium patens, Physcomitrium patens (Hedw.) Mitt.
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