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STRINGSTRING
PP1S133_24V6.1 protein (Physcomitrella patens) - STRING interaction network
"PP1S133_24V6.1" - annotation not available in Physcomitrella patens
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PP1S133_24V6.1annotation not available (851 aa)    
Predicted Functional Partners:
PP1S25_370V6.1
Predicted protein (362 aa)
           
  0.894
PP1S22_299V6.1
Chloride channel protein (798 aa)
     
   
  0.849
PP1S331_40V6.1
Chloride channel protein (777 aa)
     
   
  0.838
PP1S137_191V6.1
Chloride channel protein (787 aa)
     
   
  0.838
PP1S16_337V6.1
annotation not available (980 aa)
   
   
  0.805
PP1S114_83V6.1
Predicted protein (937 aa)
   
   
  0.805
PP1S21_268V6.1
Predicted protein (332 aa)
     
   
  0.647
PP1S444_8V6.1
annotation not available (145 aa)
         
  0.637
PP1S28_283V6.1
annotation not available (145 aa)
         
  0.637
PP1S120_79V6.1
Lactoylglutathione lyase; Catalyzes the conversion of hemimercaptal, formed from methylglyoxal and glutathione, to S-lactoylglutathione (254 aa)
         
  0.637
Your Current Organism:
Physcomitrella patens
NCBI taxonomy Id: 3218
Other names: P. patens, Physcomitrella patens, Physcomitrella patens (Hedw.) Bruch & Schimp., Physcomitrella patens subsp. patens, Physcomitrium patens, Physcomitrium patens (Hedw.) Mitt.
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