STRINGSTRING
PP1S134_62V6.1 protein (Physcomitrella patens) - STRING interaction network
"PP1S134_62V6.1" - Predicted protein in Physcomitrella patens
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PP1S134_62V6.1Predicted protein (432 aa)    
Predicted Functional Partners:
PP1S63_62V6.1
Predicted protein (225 aa)
     
 
  0.957
PP1S236_48V6.1
Predicted protein (576 aa)
     
 
  0.957
PP1S118_123V6.1
Predicted protein (487 aa)
     
 
  0.957
PP1S114_14V6.1
Predicted protein (502 aa)
   
 
  0.955
PP1S123_7V6.1
Predicted protein (333 aa)
   
 
  0.950
PP1S210_98V6.1
Predicted protein (605 aa)
 
 
  0.924
PP1S166_41V6.1
Annotation not available (578 aa)
 
 
  0.924
PP1S211_145V6.1
Predicted protein; Catalyzes the conversion of zeta-carotene to lycopene via the intermediary of neurosporene. It carries out two consecutive desaturations (introduction of double bonds) at positions C-7 and C-7’ (593 aa)
 
 
  0.916
PP1S277_10V6.3
Predicted protein; Catalyzes the conversion of zeta-carotene to lycopene via the intermediary of neurosporene. It carries out two consecutive desaturations (introduction of double bonds) at positions C-7 and C-7’ (588 aa)
 
 
  0.915
PP1S149_171V6.1
Predicted protein; Catalyzes the conversion of zeta-carotene to lycopene via the intermediary of neurosporene. It carries out two consecutive desaturations (introduction of double bonds) at positions C-7 and C-7’ (597 aa)
 
 
  0.914
Your Current Organism:
Physcomitrella patens
NCBI taxonomy Id: 3218
Other names: Bryophyta, Bryophytina, Bryopsida, Funariaceae, Funariales, Funariidae, Moss Superclass V, Musci, P. patens, Physcomitrella, Physcomitrella Bruch & Schimp, Physcomitrella patens, Physcomitrella patens (Hedw.) Bruch & Schimp., Physcomitrium patens, Physcomitrium patens (Hedw.) Mitt., bryophytes, mosses
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