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STRINGSTRING
PP1S136_187V6.2 protein (Physcomitrella patens) - STRING interaction network
"PP1S136_187V6.2" - annotation not available in Physcomitrella patens
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PP1S136_187V6.2annotation not available (85 aa)    
Predicted Functional Partners:
PP1S322_39V6.1
annotation not available (157 aa)
     
 
  0.992
PP1S215_88V6.1
Predicted protein; Cytochrome b-c1 complex subunit 7 (125 aa)
     
 
  0.992
PP1S14_64V6.1
Predicted protein; Cytochrome b-c1 complex subunit 7 (124 aa)
     
 
  0.992
PP1S6_128V6.1
annotation not available (42 aa)
     
 
  0.992
PP1S6_114V6.1
annotation not available (42 aa)
     
 
  0.992
PP1S491_11V6.1
Predicted protein (81 aa)
     
 
  0.992
PP1S80_58V6.1
annotation not available (264 aa)
     
 
  0.992
PP1S61_228V6.1
Predicted protein (321 aa)
     
 
  0.992
PP1S61_215V6.1
Predicted protein (321 aa)
     
 
  0.992
PP1S2_788V6.1
Predicted protein (322 aa)
     
 
  0.992
Your Current Organism:
Physcomitrella patens
NCBI taxonomy Id: 3218
Other names: P. patens, Physcomitrella patens, Physcomitrella patens (Hedw.) Bruch & Schimp., Physcomitrella patens subsp. patens, Physcomitrium patens, Physcomitrium patens (Hedw.) Mitt.
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