STRINGSTRING
PP1S136_41V6.1 protein (Physcomitrella patens) - STRING interaction network
"PP1S136_41V6.1" - Predicted protein in Physcomitrella patens
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PP1S136_41V6.1Predicted protein (432 aa)    
Predicted Functional Partners:
PP1S5_30V6.1
Predicted protein (394 aa)
 
 
  0.973
PP1S239_18V6.1
Predicted protein (423 aa)
     
 
  0.965
POR1
Predicted proteinProtochlorophyllide reductase chloroplast (402 aa)
   
 
  0.954
POR2
Predicted protein (406 aa)
   
 
  0.954
PP1S15_384V6.1
Predicted protein (174 aa)
     
    0.952
PP1S224_39V6.1
Predicted protein (201 aa)
   
  0.943
PP1S104_73V6.1
Predicted protein (201 aa)
   
  0.943
PP1S290_42V6.1
Predicted protein (598 aa)
     
 
  0.905
PP1S225_73V6.1
Predicted protein (601 aa)
     
 
  0.905
PP1S9_331V6.1
Annotation not available (347 aa)
         
    0.900
Your Current Organism:
Physcomitrella patens
NCBI taxonomy Id: 3218
Other names: Bryophyta, Bryophytina, Bryopsida, Funariaceae, Funariales, Funariidae, Moss Superclass V, Musci, P. patens, Physcomitrella, Physcomitrella Bruch & Schimp, Physcomitrella patens, Physcomitrella patens (Hedw.) Bruch & Schimp., Physcomitrium patens, Physcomitrium patens (Hedw.) Mitt., bryophytes, mosses
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