• Version:
  • 11.0 (preview - - version 10.5 still available here)
STRINGSTRING
PP1S136_41V6.1 protein (Physcomitrella patens) - STRING interaction network
"PP1S136_41V6.1" - Predicted protein in Physcomitrella patens
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PP1S136_41V6.1Predicted protein (432 aa)    
Predicted Functional Partners:
PP1S5_30V6.1
Predicted protein (394 aa)
 
 
  0.999
PP1S372_25V6.1
Predicted protein (358 aa)
 
   
  0.993
PP1S66_287V6.1
Mg-protoporphyrin IX chelatase; Involved in chlorophyll biosynthesis. Catalyzes the insertion of magnesium ion into protoporphyrin IX to yield Mg- protoporphyrin IX; Belongs to the Mg-chelatase subunits D/I family (779 aa)
   
   
  0.985
POR1
Predicted protein; Protochlorophyllide reductase chloroplast (402 aa)
   
 
  0.981
POR2
Uncharacterized protein (406 aa)
   
 
  0.981
PP1S290_42V6.1
Predicted protein (598 aa)
   
 
  0.967
PP1S225_73V6.1
Predicted protein (601 aa)
   
 
  0.967
PP1S97_248V6.1
Magnesium-protoporphyrin IX monomethyl ester [oxidative] cyclase, chloroplast (360 aa)
     
 
  0.962
PP1S239_18V6.1
Predicted protein (423 aa)
     
 
  0.962
PP1S89_220V6.1
Predicted protein (335 aa)
   
   
  0.955
Your Current Organism:
Physcomitrella patens
NCBI taxonomy Id: 3218
Other names: P. patens, Physcomitrella patens, Physcomitrella patens (Hedw.) Bruch & Schimp., Physcomitrella patens subsp. patens, Physcomitrium patens, Physcomitrium patens (Hedw.) Mitt.
Server load: low (13%) [HD]