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STRINGSTRING
PP1S136_5V6.3 protein (Physcomitrella patens) - STRING interaction network
"PP1S136_5V6.3" - Predicted protein in Physcomitrella patens
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PP1S136_5V6.3Predicted protein; Belongs to the protein kinase superfamily (759 aa)    
Predicted Functional Partners:
PP1S352_22V6.1
Predicted protein (911 aa)
     
 
0.818
PP1S341_18V6.1
Predicted protein (994 aa)
     
 
0.818
PP1S188_58V6.1
Predicted protein (963 aa)
     
 
0.818
PP1S31_252V6.1
Predicted protein; Belongs to the protein kinase superfamily (764 aa)
         
 
0.800
PP1S22_359V6.1
Predicted protein (863 aa)
     
 
  0.664
PP1S40_3V6.1
annotation not available (220 aa)
     
 
  0.651
PP1S151_2V6.1
Predicted protein (533 aa)
     
 
0.649
PP1S92_27V6.1
Predicted protein (519 aa)
     
 
0.648
PP1S106_83V6.1
Predicted protein; Belongs to the protein kinase superfamily (342 aa)
     
 
0.635
PP1S32_219V6.1
Predicted protein; Belongs to the protein kinase superfamily (352 aa)
     
 
0.635
Your Current Organism:
Physcomitrella patens
NCBI taxonomy Id: 3218
Other names: P. patens, Physcomitrella patens, Physcomitrella patens (Hedw.) Bruch & Schimp., Physcomitrella patens subsp. patens, Physcomitrium patens, Physcomitrium patens (Hedw.) Mitt.
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