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STRINGSTRING
PP1S136_88V6.1 protein (Physcomitrella patens) - STRING interaction network
"PP1S136_88V6.1" - Predicted protein in Physcomitrella patens
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PP1S136_88V6.1Predicted protein (390 aa)    
Predicted Functional Partners:
PP1S344_11V6.1
annotation not available (2091 aa)
     
 
  0.683
PP1S177_30V6.1
Phospholipid-transporting ATPase; Belongs to the cation transport ATPase (P-type) (TC 3.A.3) family. Type IV subfamily (1104 aa)
     
 
  0.644
PP1S98_191V6.1
annotation not available (316 aa)
     
   
  0.630
PP1S87_152V6.1
Phospholipid-transporting ATPase; Belongs to the cation transport ATPase (P-type) (TC 3.A.3) family. Type IV subfamily (1199 aa)
     
 
  0.614
PP1S156_90V6.1
annotation not available (932 aa)
     
 
  0.614
PP1S130_290V6.1
annotation not available (1587 aa)
     
 
  0.614
PP1S32_129V6.1
annotation not available (747 aa)
     
 
  0.611
PP1S311_15V6.1
Predicted protein (833 aa)
     
 
  0.611
PP1S39_64V6.1
annotation not available (1367 aa)
     
 
  0.591
PP1S38_368V6.1
annotation not available (1257 aa)
     
 
  0.591
Your Current Organism:
Physcomitrella patens
NCBI taxonomy Id: 3218
Other names: P. patens, Physcomitrella patens, Physcomitrella patens (Hedw.) Bruch & Schimp., Physcomitrella patens subsp. patens, Physcomitrium patens, Physcomitrium patens (Hedw.) Mitt.
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