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STRINGSTRING
PP1S137_288V6.1 protein (Physcomitrella patens) - STRING interaction network
"PP1S137_288V6.1" - Predicted protein in Physcomitrella patens
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PP1S137_288V6.1Predicted protein (282 aa)    
Predicted Functional Partners:
PP1S34_87V6.1
Predicted protein; Belongs to the heat shock protein 70 family (780 aa)
 
 
  0.879
PP1S6_146V6.1
Predicted protein; Belongs to the heat shock protein 70 family (710 aa)
 
 
  0.783
PP1S153_153V6.1
Predicted protein; Belongs to the heat shock protein 70 family (714 aa)
 
 
  0.783
PP1S153_146V6.1
Predicted protein; Belongs to the heat shock protein 70 family (714 aa)
 
 
  0.783
PP1S115_168V6.2
Predicted protein; Belongs to the heat shock protein 70 family (707 aa)
 
 
  0.782
PP1S288_23V6.1
Predicted protein; Belongs to the heat shock protein 70 family (662 aa)
 
 
  0.751
PP1S181_3V6.1
Predicted protein; Belongs to the heat shock protein 70 family (662 aa)
 
 
  0.750
PP1S90_51V6.1
annotation not available (231 aa)
           
  0.708
PP1S18_322V6.1
Predicted protein (362 aa)
   
     
  0.697
PP1S29_56V6.1
annotation not available (1242 aa)
           
  0.693
Your Current Organism:
Physcomitrella patens
NCBI taxonomy Id: 3218
Other names: P. patens, Physcomitrella patens, Physcomitrella patens (Hedw.) Bruch & Schimp., Physcomitrella patens subsp. patens, Physcomitrium patens, Physcomitrium patens (Hedw.) Mitt.
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