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STRINGSTRING
PP1S137_3V6.1 protein (Physcomitrella patens) - STRING interaction network
"PP1S137_3V6.1" - Predicted protein in Physcomitrella patens
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PP1S137_3V6.1Predicted protein (540 aa)    
Predicted Functional Partners:
PP1S114_86V6.1
Predicted protein (741 aa)
   
   
  0.674
PP1S144_58V6.1
Predicted protein (381 aa)
         
  0.668
PP1S101_225V6.1
Predicted protein; Belongs to the FPP/GGPP synthase family (360 aa)
     
 
  0.666
PP1S336_16V6.2
NAD(P)H-hydrate epimerase; Catalyzes the epimerization of the S- and R-forms of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration. This is a prerequisite for the S- specific NAD(P)H-hydrate dehydratase to allow the repair of both epimers of NAD(P)HX; Belongs to the NnrE/AIBP family (597 aa)
         
  0.655
PP1S149_31V6.1
Predicted protein (588 aa)
   
   
  0.640
PP1S297_57V6.1
annotation not available (510 aa)
   
 
  0.614
PP1S177_83V6.1
annotation not available (317 aa)
   
 
  0.614
PP1S165_126V6.1
annotation not available (584 aa)
   
 
  0.614
PP1S17_13V6.1
tRNA (adenine(58)-N(1))-methyltransferase (339 aa)
   
   
  0.610
PP1S234_27V6.1
annotation not available (275 aa)
   
 
  0.608
Your Current Organism:
Physcomitrella patens
NCBI taxonomy Id: 3218
Other names: P. patens, Physcomitrella patens, Physcomitrella patens (Hedw.) Bruch & Schimp., Physcomitrella patens subsp. patens, Physcomitrium patens, Physcomitrium patens (Hedw.) Mitt.
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