• Version:
  • 11.0 (preview - - version 10.5 still available here)
STRINGSTRING
PP1S137_78V6.1 protein (Physcomitrella patens) - STRING interaction network
"PP1S137_78V6.1" - Predicted protein in Physcomitrella patens
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PP1S137_78V6.1Predicted protein (419 aa)    
Predicted Functional Partners:
PP1S8_116V6.1
Predicted protein (617 aa)
   
 
  0.999
PP1S98_142V6.1
Predicted protein (386 aa)
   
 
  0.999
PP1S381_17V6.1
Predicted protein (527 aa)
   
 
  0.984
PP1S198_153V6.2
Predicted protein (528 aa)
   
 
  0.984
PP1S372_25V6.1
Predicted protein (358 aa)
     
   
  0.970
PP1S7_75V6.1
annotation not available (340 aa)
   
 
  0.953
PP1S26_93V6.1
Predicted protein (272 aa)
   
 
  0.953
PP1S15_445V6.1
Predicted protein; Belongs to the SecY/SEC61-alpha family (543 aa)
     
 
  0.921
PP1S332_22V6.1
Predicted protein (419 aa)
   
 
  0.903
PP1S4_490V6.1
Peptidyl-prolyl cis-trans isomerase; PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides (362 aa)
   
 
  0.901
Your Current Organism:
Physcomitrella patens
NCBI taxonomy Id: 3218
Other names: P. patens, Physcomitrella patens, Physcomitrella patens (Hedw.) Bruch & Schimp., Physcomitrella patens subsp. patens, Physcomitrium patens, Physcomitrium patens (Hedw.) Mitt.
Server load: low (8%) [HD]